Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV26-1A0A087WT03 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 COMP-202ENST00000425807 2292 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 ARMC10P1-201ENST00000313754 855 ntBASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 AL671277.2-201ENST00000458060 996 ntBASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV26-1A0A087WT03 AL162741.1-201ENST00000565563 1558 ntBASIC12.9□□□□□ -0.35
TRAV26-1A0A087WT03 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 AC090164.3-201ENST00000610780 2143 ntBASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 AC135050.7-201ENST00000624508 2218 ntBASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 LINC01311-201ENST00000565162 1445 ntBASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 KRT18P35-201ENST00000510488 1269 ntBASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 HYMAI-201ENST00000635591 3347 ntBASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV26-1A0A087WT03 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms