Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 MTCL1P1-201ENST00000446207 792 ntBASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 LINC00265-3P-201ENST00000447588 903 ntBASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 Z69720.1-201ENST00000601483 472 ntBASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLCA3PQ9Y6N3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 TOB2P1-201ENST00000469761 992 ntBASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 DUTP2-201ENST00000519164 463 ntBASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 TPSP2-201ENST00000561760 610 ntBASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 MIR3180-1-201ENST00000580374 94 ntBASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 MIR3180-3-201ENST00000584616 94 ntBASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLCA3PQ9Y6N3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 AP000867.3-201ENST00000524675 377 ntBASIC16.78■□□□□ 0.28
CLCA3PQ9Y6N3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms