Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARFGEF1Q9Y6D6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 AL135744.1-201ENST00000565098 629 ntBASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 AC026120.1-201ENST00000611536 926 ntBASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 AC018445.3-201ENST00000624177 1945 ntBASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
ARFGEF1Q9Y6D6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 AC107890.1-201ENST00000422478 521 ntBASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 AL390754.1-201ENST00000619088 582 ntBASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ARFGEF1Q9Y6D6 ESPNP-201ENST00000270691 2015 ntBASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 GMCL1P1-201ENST00000463439 1581 ntBASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 AC009336.1-201ENST00000608941 1553 ntBASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 AL590787.1-201ENST00000568856 1315 ntBASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms