Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 AC100803.2-201ENST00000562459 1963 ntBASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 NUS1P2-201ENST00000417358 873 ntBASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 AC112698.1-201ENST00000510299 916 ntBASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL4A3BPQ9Y5P4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 AC004870.1-201ENST00000315132 882 ntBASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 LINC01711-201ENST00000598340 967 ntBASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A3BPQ9Y5P4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 POM121L3P-201ENST00000419331 1163 ntBASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 AC096582.2-201ENST00000510860 516 ntBASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 AC116407.2-201ENST00000613639 860 ntBASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COL4A3BPQ9Y5P4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
COL4A3BPQ9Y5P4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms