Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 RBM17P3-201ENST00000417687 1192 ntBASIC18.95■□□□□ 0.62
SIX4Q9UIU6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 TPM4P1-201ENST00000436100 807 ntBASIC18.95■□□□□ 0.62
SIX4Q9UIU6 FAAHP1-202ENST00000446499 1238 ntBASIC18.95■□□□□ 0.62
SIX4Q9UIU6 FGFR3P6-201ENST00000457012 610 ntBASIC18.95■□□□□ 0.62
SIX4Q9UIU6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 AC008608.2-201ENST00000606089 416 ntBASIC18.95■□□□□ 0.62
SIX4Q9UIU6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 AC132938.5-201ENST00000624980 1813 ntBASIC18.95■□□□□ 0.62
SIX4Q9UIU6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 AL355312.1-201ENST00000407115 2176 ntBASIC18.95■□□□□ 0.62
SIX4Q9UIU6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX4Q9UIU6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 MTDHP3-201ENST00000594186 672 ntBASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AL121912.1-201ENST00000603683 238 ntBASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 TP73-AS1-207ENST00000624167 988 ntBASIC18.94■□□□□ 0.62
SIX4Q9UIU6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SIX4Q9UIU6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 AC002558.1-201ENST00000488906 803 ntBASIC18.93■□□□□ 0.62
SIX4Q9UIU6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 AC073592.5-201ENST00000624854 528 ntBASIC18.93■□□□□ 0.62
SIX4Q9UIU6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
SIX4Q9UIU6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX4Q9UIU6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX4Q9UIU6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX4Q9UIU6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX4Q9UIU6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX4Q9UIU6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX4Q9UIU6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX4Q9UIU6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms