Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 SPDYE15P-201ENST00000424157 909 ntBASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 FLJ16779-201ENST00000612722 7638 ntBASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00474Q9P2X8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 AL024508.2-201ENST00000607749 1894 ntBASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 MIR662-201ENST00000384847 95 ntBASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 AC116407.2-201ENST00000613639 860 ntBASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 AC084018.2-201ENST00000613093 2607 ntBASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00474Q9P2X8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms