Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC046158.3-201ENST00000624947 2558 ntBASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 AC008040.2-201ENST00000461049 708 ntBASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 AL031985.4-201ENST00000642138 673 ntBASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCM2LQ9NUG4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 GPAT2P1-201ENST00000444924 1672 ntBASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 BX664615.1-201ENST00000443558 458 ntBASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 EGLN1P1-201ENST00000531623 762 ntBASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCM2LQ9NUG4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 AC036111.1-201ENST00000533973 1582 ntBASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 HLA-J-201ENST00000462773 1622 ntBASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 AC063952.2-201ENST00000498792 1227 ntBASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 AC011298.2-201ENST00000617989 482 ntBASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCM2LQ9NUG4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCM2LQ9NUG4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CCM2LQ9NUG4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms