Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 AC100803.2-201ENST00000562459 1963 ntBASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 AC073621.1-201ENST00000392730 636 ntBASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 AC092364.2-202ENST00000597012 1073 ntBASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 FLJ13224-201ENST00000313737 1514 ntBASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.79■□□□□ 0.76
PDLIM7Q9NR12 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AL645939.2-201ENST00000427340 991 ntBASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDLIM7Q9NR12 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 AC079776.2-201ENST00000641154 1609 ntBASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 AC138028.4-201ENST00000564984 1845 ntBASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 PGM5P2-202ENST00000637225 1043 ntBASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 AL022326.1-202ENST00000641533 845 ntBASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 AC002310.6-201ENST00000624451 1377 ntBASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDLIM7Q9NR12 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDLIM7Q9NR12 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PDLIM7Q9NR12 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PDLIM7Q9NR12 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.76■□□□□ 0.75
PDLIM7Q9NR12 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms