Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 AC005336.2-201ENST00000593183 939 ntBASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 AC099336.1-202ENST00000602961 463 ntBASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRDM9Q9NQV7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 AC005104.2-201ENST00000427818 678 ntBASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 AC125634.1-201ENST00000438758 1403 ntBASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRDM9Q9NQV7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 AC134043.2-201ENST00000624206 2238 ntBASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 AC009533.2-201ENST00000543664 586 ntBASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 AL138831.2-201ENST00000606564 490 ntBASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 AC133963.1-201ENST00000504166 1679 ntBASIC16.77■□□□□ 0.28
PRDM9Q9NQV7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRDM9Q9NQV7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms