Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 NAPSB-206ENST00000562112 1266 ntBASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 AC005915.1-201ENST00000624912 2018 ntBASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC52A3Q9NQ40 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 KRT17P2-201ENST00000300992 1314 ntBASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 AL391807.1-203ENST00000604392 2365 ntBASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 AL139327.4-201ENST00000612362 153 ntBASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 LINC02012-201ENST00000608206 1725 ntBASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC52A3Q9NQ40 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 AL138966.2-201ENST00000621997 464 ntBASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC52A3Q9NQ40 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms