Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRDQ9H2X0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.72■□□□□ 0.43
CHRDQ9H2X0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHRDQ9H2X0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHRDQ9H2X0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 PTCHD3P3-201ENST00000403073 906 ntBASIC17.71■□□□□ 0.43
CHRDQ9H2X0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 AC023141.13-201ENST00000604991 943 ntBASIC17.71■□□□□ 0.43
CHRDQ9H2X0 AC093512.1-201ENST00000617969 520 ntBASIC17.71■□□□□ 0.43
CHRDQ9H2X0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
CHRDQ9H2X0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CHRDQ9H2X0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CHRDQ9H2X0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 AC019129.2-201ENST00000609837 1235 ntBASIC17.7■□□□□ 0.42
CHRDQ9H2X0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRDQ9H2X0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 AC018445.3-201ENST00000624177 1945 ntBASIC17.69■□□□□ 0.42
CHRDQ9H2X0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 AC004461.1-201ENST00000412461 403 ntBASIC17.69■□□□□ 0.42
CHRDQ9H2X0 AC244107.1-201ENST00000442033 332 ntBASIC17.69■□□□□ 0.42
CHRDQ9H2X0 HLA-J-203ENST00000494367 1087 ntBASIC17.69■□□□□ 0.42
CHRDQ9H2X0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 AC105339.1-204ENST00000636249 355 ntBASIC17.69■□□□□ 0.42
CHRDQ9H2X0 AC092902.6-201ENST00000641783 218 ntBASIC17.69■□□□□ 0.42
CHRDQ9H2X0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CHRDQ9H2X0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRDQ9H2X0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms