Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 RNA5SP421-201ENST00000516864 134 ntBASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 AJ011932.1-201ENST00000621707 465 ntBASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2OQ9C0C9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 AC009102.3-201ENST00000623118 1491 ntBASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 PMS2P4-201ENST00000412466 1052 ntBASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 LINC00602-201ENST00000629776 2065 ntBASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2OQ9C0C9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 MRPL20P1-201ENST00000400819 433 ntBASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 FAM58CP-201ENST00000435741 640 ntBASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 FAM86GP-201ENST00000448322 971 ntBASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 PRYP5-201ENST00000451909 266 ntBASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 AC005225.4-201ENST00000557330 545 ntBASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
UBE2OQ9C0C9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 LTB4R2-202ENST00000528054 3092 ntBASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 KRT18P41-201ENST00000518924 1277 ntBASIC19.48■□□□□ 0.71
UBE2OQ9C0C9 PDPK2P-202ENST00000562415 1191 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms