Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 KSR1P1-201ENST00000446298 240 ntBASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 AC133561.5-201ENST00000635547 218 ntBASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NDUFAF3Q9BU61 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.77□□□□□ -0.2
NDUFAF3Q9BU61 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NDUFAF3Q9BU61 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NDUFAF3Q9BU61 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.77□□□□□ -0.2
NDUFAF3Q9BU61 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 KRT16P1-201ENST00000399124 1418 ntBASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 PCDHA14-201ENST00000506751 2298 ntBASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 CR392000.1-201ENST00000624770 1228 ntBASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NDUFAF3Q9BU61 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NDUFAF3Q9BU61 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms