Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.87■□□□□ 0.61
PAAF1Q9BRP4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 BX276092.7-203ENST00000637198 1536 ntBASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 KLF4P1-201ENST00000412782 1185 ntBASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 DDX43P3-201ENST00000441064 443 ntBASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 AC116407.2-201ENST00000613639 860 ntBASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PAAF1Q9BRP4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 BICD1-207ENST00000551848 1962 ntBASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 AC009947.1-201ENST00000444350 727 ntBASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PAAF1Q9BRP4 FLJ13224-201ENST00000313737 1514 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 KRT18P55-202ENST00000578578 1546 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 AC138028.4-201ENST00000564984 1845 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 KRT18P13-201ENST00000400056 1290 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 MED15P5-201ENST00000423150 992 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 AC092865.5-201ENST00000545435 363 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 AC027601.4-201ENST00000611259 610 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 AC139530.3-201ENST00000620344 690 ntBASIC18.84■□□□□ 0.61
PAAF1Q9BRP4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms