Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.5□□□□□ -0.25
VGLL1Q99990 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.5□□□□□ -0.25
VGLL1Q99990 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 LINC00602-201ENST00000629776 2065 ntBASIC13.5□□□□□ -0.25
VGLL1Q99990 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CROCCP2-202ENST00000412962 2773 ntBASIC13.49□□□□□ -0.25
VGLL1Q99990 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.49□□□□□ -0.25
VGLL1Q99990 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 OR6D1P-203ENST00000641209 4860 ntBASIC13.49□□□□□ -0.25
VGLL1Q99990 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.49□□□□□ -0.25
VGLL1Q99990 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 FITM1-202ENST00000559294 800 ntBASIC13.49□□□□□ -0.25
VGLL1Q99990 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 FLJ16779-201ENST00000612722 7638 ntBASIC13.49□□□□□ -0.25
VGLL1Q99990 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VGLL1Q99990 AL138688.1-201ENST00000624851 1594 ntBASIC13.49□□□□□ -0.25
VGLL1Q99990 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.49□□□□□ -0.25
VGLL1Q99990 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VGLL1Q99990 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VGLL1Q99990 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.48□□□□□ -0.25
VGLL1Q99990 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VGLL1Q99990 MIR718-201ENST00000390190 70 ntBASIC13.48□□□□□ -0.25
VGLL1Q99990 MIR1238-201ENST00000408483 83 ntBASIC13.48□□□□□ -0.25
VGLL1Q99990 TSPY7P-201ENST00000431358 1114 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms