Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CCL13Q99616 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCL13Q99616 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL13Q99616 AC012317.2-201ENST00000623305 2251 ntBASIC14.9□□□□□ -0.02
CCL13Q99616 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL13Q99616 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL13Q99616 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CCL13Q99616 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL13Q99616 AC009949.1-201ENST00000623048 1830 ntBASIC14.89□□□□□ -0.03
CCL13Q99616 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CCL13Q99616 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL13Q99616 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
CCL13Q99616 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCL13Q99616 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCL13Q99616 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 AC246785.2-201ENST00000432512 513 ntBASIC14.89□□□□□ -0.03
CCL13Q99616 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 KRT17P6-201ENST00000453795 1220 ntBASIC14.89□□□□□ -0.03
CCL13Q99616 MINOS1P3-201ENST00000457048 203 ntBASIC14.89□□□□□ -0.03
CCL13Q99616 AC104819.1-201ENST00000504587 486 ntBASIC14.89□□□□□ -0.03
CCL13Q99616 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.89□□□□□ -0.03
CCL13Q99616 AL353801.3-201ENST00000609898 542 ntBASIC14.89□□□□□ -0.03
CCL13Q99616 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCL13Q99616 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCL13Q99616 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
CCL13Q99616 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL13Q99616 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.88□□□□□ -0.03
CCL13Q99616 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL13Q99616 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCL13Q99616 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.88□□□□□ -0.03
CCL13Q99616 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.88□□□□□ -0.03
CCL13Q99616 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCL13Q99616 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.88□□□□□ -0.03
CCL13Q99616 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CCL13Q99616 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.88□□□□□ -0.03
CCL13Q99616 AC005336.2-201ENST00000593183 939 ntBASIC14.88□□□□□ -0.03
CCL13Q99616 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.88□□□□□ -0.03
CCL13Q99616 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCL13Q99616 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.88□□□□□ -0.03
CCL13Q99616 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.88□□□□□ -0.03
CCL13Q99616 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CCL13Q99616 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCL13Q99616 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL13Q99616 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.88□□□□□ -0.03
CCL13Q99616 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL13Q99616 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CCL13Q99616 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CCL13Q99616 SLC25A6P5-201ENST00000435663 894 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms