Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SCAF11Q99590 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SCAF11Q99590 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF11Q99590 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF11Q99590 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF11Q99590 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF11Q99590 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
SCAF11Q99590 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC25.28■■□□□ 1.64
SCAF11Q99590 TAF8-206ENST00000472818 719 ntTSL 2 BASIC25.28■■□□□ 1.64
SCAF11Q99590 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC25.28■■□□□ 1.64
SCAF11Q99590 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC25.28■■□□□ 1.64
SCAF11Q99590 AC004449.1-201ENST00000564240 433 ntBASIC25.28■■□□□ 1.64
SCAF11Q99590 AL390955.2-201ENST00000603032 514 ntBASIC25.28■■□□□ 1.64
SCAF11Q99590 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 AC105339.1-204ENST00000636249 355 ntBASIC25.28■■□□□ 1.64
SCAF11Q99590 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC25.28■■□□□ 1.64
SCAF11Q99590 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC25.28■■□□□ 1.64
SCAF11Q99590 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 SP100-208ENST00000427101 1922 ntTSL 2 BASIC25.28■■□□□ 1.64
SCAF11Q99590 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SCAF11Q99590 AC093677.2-201ENST00000600169 1863 ntBASIC25.28■■□□□ 1.64
SCAF11Q99590 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SCAF11Q99590 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SCAF11Q99590 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC25.28■■□□□ 1.64
SCAF11Q99590 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC25.28■■□□□ 1.64
SCAF11Q99590 NKTR-203ENST00000442970 646 ntTSL 2 BASIC25.28■■□□□ 1.64
SCAF11Q99590 RBM7-207ENST00000544582 692 ntTSL 3 BASIC25.28■■□□□ 1.64
SCAF11Q99590 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC25.28■■□□□ 1.64
SCAF11Q99590 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
SCAF11Q99590 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SCAF11Q99590 TK1-204ENST00000590430 683 ntTSL 3 BASIC25.28■■□□□ 1.64
SCAF11Q99590 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
SCAF11Q99590 AJ011932.1-201ENST00000621707 465 ntBASIC25.28■■□□□ 1.64
SCAF11Q99590 Z92544.3-201ENST00000624747 417 ntBASIC25.28■■□□□ 1.64
SCAF11Q99590 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC25.27■■□□□ 1.64
SCAF11Q99590 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SCAF11Q99590 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC25.27■■□□□ 1.64
SCAF11Q99590 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC25.27■■□□□ 1.64
SCAF11Q99590 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SCAF11Q99590 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SCAF11Q99590 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SCAF11Q99590 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SCAF11Q99590 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
SCAF11Q99590 PON3-205ENST00000451904 1053 ntTSL 3 BASIC25.27■■□□□ 1.64
SCAF11Q99590 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC25.27■■□□□ 1.64
SCAF11Q99590 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC25.27■■□□□ 1.64
SCAF11Q99590 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC25.27■■□□□ 1.64
SCAF11Q99590 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC25.27■■□□□ 1.64
SCAF11Q99590 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SCAF11Q99590 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC25.26■■□□□ 1.64
SCAF11Q99590 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC25.26■■□□□ 1.64
SCAF11Q99590 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC25.26■■□□□ 1.64
SCAF11Q99590 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF11Q99590 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC25.26■■□□□ 1.63
SCAF11Q99590 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
SCAF11Q99590 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
SCAF11Q99590 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF11Q99590 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF11Q99590 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC25.26■■□□□ 1.63
SCAF11Q99590 AC074386.1-202ENST00000463561 864 ntBASIC25.26■■□□□ 1.63
SCAF11Q99590 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC25.26■■□□□ 1.63
SCAF11Q99590 DUTP2-201ENST00000519164 463 ntBASIC25.26■■□□□ 1.63
SCAF11Q99590 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC25.26■■□□□ 1.63
SCAF11Q99590 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC25.26■■□□□ 1.63
SCAF11Q99590 AL035252.4-201ENST00000624174 288 ntBASIC25.26■■□□□ 1.63
SCAF11Q99590 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF11Q99590 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC25.26■■□□□ 1.63
SCAF11Q99590 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF11Q99590 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
SCAF11Q99590 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF11Q99590 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SCAF11Q99590 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
SCAF11Q99590 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC25.25■■□□□ 1.63
SCAF11Q99590 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC25.25■■□□□ 1.63
SCAF11Q99590 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
SCAF11Q99590 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC25.25■■□□□ 1.63
SCAF11Q99590 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF11Q99590 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC25.25■■□□□ 1.63
SCAF11Q99590 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC25.25■■□□□ 1.63
SCAF11Q99590 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC25.25■■□□□ 1.63
SCAF11Q99590 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SCAF11Q99590 AC025580.3-201ENST00000617932 1424 ntBASIC25.25■■□□□ 1.63
SCAF11Q99590 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
SCAF11Q99590 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC25.25■■□□□ 1.63
SCAF11Q99590 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms