Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.77■□□□□ 0.91
CDK5RAP2Q96SN8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.91
CDK5RAP2Q96SN8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 CRYGEP-201ENST00000412192 528 ntBASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP2Q96SN8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 RPSAP43-201ENST00000402237 625 ntBASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 HCG4B-203ENST00000450128 991 ntBASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 RPS15P9-201ENST00000494093 319 ntBASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 IGHV3-52-201ENST00000519770 353 ntBASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDK5RAP2Q96SN8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 KRT18P3-201ENST00000451602 1288 ntBASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 RNA5SP416-201ENST00000516838 111 ntBASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 AC006538.3-201ENST00000612495 578 ntBASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 AC055717.3-201ENST00000622967 595 ntBASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP2Q96SN8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 AC023274.1-201ENST00000418278 595 ntBASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 KRT18P2-201ENST00000447938 1258 ntBASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SIGLEC30P-201ENST00000455569 941 ntBASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms