Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 AC008687.5-201ENST00000593746 558 ntBASIC14.42□□□□□ -0.1
RAB40CQ96S21 AC073195.1-201ENST00000607241 877 ntBASIC14.42□□□□□ -0.1
RAB40CQ96S21 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 AC132938.6-201ENST00000623828 1655 ntBASIC14.42□□□□□ -0.1
RAB40CQ96S21 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB40CQ96S21 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RAB40CQ96S21 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 PKD1P5-201ENST00000532415 10291 ntBASIC14.41□□□□□ -0.1
RAB40CQ96S21 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 FAM197Y4-202ENST00000622692 608 ntBASIC14.41□□□□□ -0.1
RAB40CQ96S21 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB40CQ96S21 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 AC016396.2-201ENST00000562575 1417 ntBASIC14.41□□□□□ -0.1
RAB40CQ96S21 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB40CQ96S21 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.4□□□□□ -0.1
RAB40CQ96S21 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 AC105020.1-201ENST00000435356 2205 ntBASIC14.4□□□□□ -0.1
RAB40CQ96S21 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 AL359736.2-201ENST00000621992 437 ntBASIC14.4□□□□□ -0.1
RAB40CQ96S21 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB40CQ96S21 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB40CQ96S21 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms