Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 COX5BP8-201ENST00000416911 349 ntBASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 PGM5P2-202ENST00000637225 1043 ntBASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AP000974.1-201ENST00000623909 2387 ntBASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 SPDYE22P-201ENST00000582158 798 ntBASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD1Q96PZ7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 SPDYE21P-201ENST00000413323 827 ntBASIC15□□□□□ -0.01
CSMD1Q96PZ7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15□□□□□ -0.01
CSMD1Q96PZ7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 AC009093.7-201ENST00000623853 1223 ntBASIC15□□□□□ -0.01
CSMD1Q96PZ7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15□□□□□ -0.01
CSMD1Q96PZ7 BASP1P1-201ENST00000430708 665 ntBASIC15□□□□□ -0.01
CSMD1Q96PZ7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 AL161938.1-201ENST00000569833 2180 ntBASIC15□□□□□ -0.01
CSMD1Q96PZ7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15□□□□□ -0.01
CSMD1Q96PZ7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CSMD1Q96PZ7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms