Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ODF3Q96PU9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 MTCL1P1-201ENST00000446207 792 ntBASIC13.12□□□□□ -0.31
ODF3Q96PU9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 AL359075.1-203ENST00000462729 1002 ntBASIC13.12□□□□□ -0.31
ODF3Q96PU9 AC002558.1-201ENST00000488906 803 ntBASIC13.12□□□□□ -0.31
ODF3Q96PU9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 AL390719.2-201ENST00000606993 987 ntBASIC13.12□□□□□ -0.31
ODF3Q96PU9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ODF3Q96PU9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.12□□□□□ -0.31
ODF3Q96PU9 AC097374.2-201ENST00000618617 1306 ntBASIC13.12□□□□□ -0.31
ODF3Q96PU9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC005521.1-201ENST00000393351 872 ntBASIC13.11□□□□□ -0.31
ODF3Q96PU9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC092647.4-201ENST00000457211 535 ntBASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC092597.1-201ENST00000487352 616 ntBASIC13.11□□□□□ -0.31
ODF3Q96PU9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 AC141586.5-201ENST00000624546 2050 ntBASIC13.11□□□□□ -0.31
ODF3Q96PU9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ODF3Q96PU9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ODF3Q96PU9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms