Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CCDC17Q96LX7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC17Q96LX7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CCDC17Q96LX7 AC148477.5-201ENST00000625164 1645 ntBASIC20.64■□□□□ 0.9
CCDC17Q96LX7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 AC104109.2-201ENST00000602919 1418 ntBASIC20.64■□□□□ 0.89
CCDC17Q96LX7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 STK19B-204ENST00000512515 211 ntBASIC20.64■□□□□ 0.89
CCDC17Q96LX7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 Z83851.2-201ENST00000609564 659 ntBASIC20.64■□□□□ 0.89
CCDC17Q96LX7 MIR1199-201ENST00000621445 119 ntBASIC20.64■□□□□ 0.89
CCDC17Q96LX7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC17Q96LX7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AC073621.1-201ENST00000392730 636 ntBASIC20.63■□□□□ 0.89
CCDC17Q96LX7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AC034105.1-201ENST00000563488 319 ntBASIC20.63■□□□□ 0.89
CCDC17Q96LX7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AL356488.2-201ENST00000602755 427 ntBASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AC004706.3-202ENST00000621574 984 ntBASIC20.63■□□□□ 0.89
CCDC17Q96LX7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC17Q96LX7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 NCF1C-201ENST00000438382 1427 ntBASIC20.62■□□□□ 0.89
CCDC17Q96LX7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.62■□□□□ 0.89
CCDC17Q96LX7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 AC009336.1-201ENST00000608941 1553 ntBASIC20.62■□□□□ 0.89
CCDC17Q96LX7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC17Q96LX7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms