Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.81■□□□□ 0.6
CALR3Q96L12 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CALR3Q96L12 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CALR3Q96L12 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 AC011676.5-201ENST00000624864 2660 ntBASIC18.8■□□□□ 0.6
CALR3Q96L12 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.8■□□□□ 0.6
CALR3Q96L12 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CALR3Q96L12 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CALR3Q96L12 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.8■□□□□ 0.6
CALR3Q96L12 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 ECEL1P2-202ENST00000465689 757 ntBASIC18.8■□□□□ 0.6
CALR3Q96L12 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.8■□□□□ 0.6
CALR3Q96L12 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 AL031432.5-201ENST00000641059 760 ntBASIC18.8■□□□□ 0.6
CALR3Q96L12 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CALR3Q96L12 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CALR3Q96L12 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CALR3Q96L12 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.79■□□□□ 0.6
CALR3Q96L12 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.79■□□□□ 0.6
CALR3Q96L12 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.79■□□□□ 0.6
CALR3Q96L12 TMEM191A-211ENST00000637163 1067 ntBASIC18.79■□□□□ 0.6
CALR3Q96L12 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CALR3Q96L12 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.79■□□□□ 0.6
CALR3Q96L12 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
CALR3Q96L12 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CALR3Q96L12 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.79■□□□□ 0.6
CALR3Q96L12 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CALR3Q96L12 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.78■□□□□ 0.6
CALR3Q96L12 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 KRT18P22-201ENST00000402024 1347 ntBASIC18.78■□□□□ 0.6
CALR3Q96L12 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.78■□□□□ 0.6
CALR3Q96L12 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CALR3Q96L12 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CALR3Q96L12 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.78■□□□□ 0.6
CALR3Q96L12 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.78■□□□□ 0.6
CALR3Q96L12 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.78■□□□□ 0.6
CALR3Q96L12 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.78■□□□□ 0.6
CALR3Q96L12 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.78■□□□□ 0.6
CALR3Q96L12 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.78■□□□□ 0.6
CALR3Q96L12 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CALR3Q96L12 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.78■□□□□ 0.6
CALR3Q96L12 AC141257.4-201ENST00000634557 245 ntBASIC18.78■□□□□ 0.6
CALR3Q96L12 AC136944.6-201ENST00000634818 245 ntBASIC18.78■□□□□ 0.6
CALR3Q96L12 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.78■□□□□ 0.6
CALR3Q96L12 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CALR3Q96L12 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CALR3Q96L12 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms