Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 DDX43P3-201ENST00000441064 443 ntBASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 AC002472.2-201ENST00000442739 958 ntBASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 AC067863.1-201ENST00000494933 530 ntBASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 DUTP2-201ENST00000519164 463 ntBASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 AC005225.4-201ENST00000557330 545 ntBASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 RN7SL204P-201ENST00000582831 262 ntBASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM43Q96BQ3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM43Q96BQ3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM43Q96BQ3 PI4KAP1-204ENST00000612579 1703 ntBASIC19.14■□□□□ 0.66
TRIM43Q96BQ3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM43Q96BQ3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.14■□□□□ 0.66
TRIM43Q96BQ3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 AC055876.3-201ENST00000431496 288 ntBASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 TIMM8BP1-201ENST00000452384 211 ntBASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 AC087641.1-201ENST00000557561 1021 ntBASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 AC138649.4-201ENST00000612222 287 ntBASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM43Q96BQ3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 FAM185BP-201ENST00000443595 716 ntBASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 ANO7L1-203ENST00000602586 1720 ntBASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 PHGDH-209ENST00000641074 1780 ntBASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM43Q96BQ3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 UGT1A2P-201ENST00000454886 866 ntBASIC19.12■□□□□ 0.65
TRIM43Q96BQ3 TERF1P3-201ENST00000505638 1227 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms