Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 AC011498.5-201ENST00000592027 486 ntBASIC17.37■□□□□ 0.37
ATL1Q8WXF7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 AC067852.2-201ENST00000590513 2313 ntBASIC17.37■□□□□ 0.37
ATL1Q8WXF7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATL1Q8WXF7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 PRORSD1P-202ENST00000563365 2154 ntBASIC17.36■□□□□ 0.37
ATL1Q8WXF7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 AC090616.6-201ENST00000582640 721 ntBASIC17.36■□□□□ 0.37
ATL1Q8WXF7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 KRT8P47-201ENST00000604727 1398 ntBASIC17.36■□□□□ 0.37
ATL1Q8WXF7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATL1Q8WXF7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 AC099398.1-201ENST00000567919 2776 ntBASIC17.35■□□□□ 0.37
ATL1Q8WXF7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 AC011270.2-201ENST00000624293 2550 ntBASIC17.35■□□□□ 0.37
ATL1Q8WXF7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATL1Q8WXF7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATL1Q8WXF7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms