Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AL157888.1-201ENST00000631930 593 ntBASIC18.22■□□□□ 0.51
SCG3Q8WXD2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.22■□□□□ 0.51
SCG3Q8WXD2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 SPDYE13P-201ENST00000445314 798 ntBASIC18.21■□□□□ 0.51
SCG3Q8WXD2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 AL136038.4-201ENST00000603606 1261 ntBASIC18.21■□□□□ 0.51
SCG3Q8WXD2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 AC080080.1-201ENST00000625121 2420 ntBASIC18.21■□□□□ 0.51
SCG3Q8WXD2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCG3Q8WXD2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.21■□□□□ 0.5
SCG3Q8WXD2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.5
SCG3Q8WXD2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 AC093010.1-201ENST00000473625 1624 ntBASIC18.2■□□□□ 0.5
SCG3Q8WXD2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 GNAS-203ENST00000306120 1878 ntBASIC18.2■□□□□ 0.5
SCG3Q8WXD2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCG3Q8WXD2 PHGDH-209ENST00000641074 1780 ntBASIC18.19■□□□□ 0.5
SCG3Q8WXD2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms