Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TMC1Q8TDI8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC24.7■■□□□ 1.54
TMC1Q8TDI8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
TMC1Q8TDI8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
TMC1Q8TDI8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
TMC1Q8TDI8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 MED22-202ENST00000371999 987 ntTSL 3 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 AF186996.4-201ENST00000467186 377 ntBASIC24.69■■□□□ 1.54
TMC1Q8TDI8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 AP001005.1-201ENST00000571755 1248 ntBASIC24.69■■□□□ 1.54
TMC1Q8TDI8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 HCG11-201ENST00000411553 5696 ntBASIC24.69■■□□□ 1.54
TMC1Q8TDI8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC24.69■■□□□ 1.54
TMC1Q8TDI8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 KRT8P47-201ENST00000604727 1398 ntBASIC24.68■■□□□ 1.54
TMC1Q8TDI8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.68■■□□□ 1.54
TMC1Q8TDI8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 RBM17P3-201ENST00000417687 1192 ntBASIC24.68■■□□□ 1.54
TMC1Q8TDI8 AC007967.3-201ENST00000434308 558 ntBASIC24.68■■□□□ 1.54
TMC1Q8TDI8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 AP005117.1-201ENST00000584346 1413 ntBASIC24.68■■□□□ 1.54
TMC1Q8TDI8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 AC138028.4-201ENST00000564984 1845 ntBASIC24.68■■□□□ 1.54
TMC1Q8TDI8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TMC1Q8TDI8 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.67■■□□□ 1.54
TMC1Q8TDI8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.67■■□□□ 1.54
TMC1Q8TDI8 AL031284.1-201ENST00000419297 478 ntBASIC24.67■■□□□ 1.54
TMC1Q8TDI8 ABCD1P5-201ENST00000445663 754 ntBASIC24.67■■□□□ 1.54
TMC1Q8TDI8 RNPS1P1-201ENST00000507437 918 ntBASIC24.67■■□□□ 1.54
TMC1Q8TDI8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 AC120114.3-201ENST00000611923 658 ntBASIC24.67■■□□□ 1.54
TMC1Q8TDI8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.67■■□□□ 1.54
TMC1Q8TDI8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC24.67■■□□□ 1.54
TMC1Q8TDI8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms