Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCHCR1Q8TD31 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 AC092647.4-201ENST00000457211 535 ntBASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 SEC1P-202ENST00000473944 940 ntBASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 AL441883.1-201ENST00000566170 1045 ntBASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 AC116407.2-201ENST00000613639 860 ntBASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 AC132938.6-201ENST00000623828 1655 ntBASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CCHCR1Q8TD31 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 HOMER2P1-201ENST00000455653 964 ntBASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 DUX4L26-201ENST00000489078 1255 ntBASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 AL049597.2-201ENST00000565575 961 ntBASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCHCR1Q8TD31 AD000864.1-201ENST00000624076 2295 ntBASIC18.52■□□□□ 0.55
CCHCR1Q8TD31 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCHCR1Q8TD31 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCHCR1Q8TD31 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCHCR1Q8TD31 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.52■□□□□ 0.55
CCHCR1Q8TD31 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
CCHCR1Q8TD31 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCHCR1Q8TD31 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms