Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 AL390754.1-201ENST00000619088 582 ntBASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.86□□□□□ -0.51
ALMS1Q8TCU4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 ANO7L1-203ENST00000602586 1720 ntBASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 AC022494.1-201ENST00000466044 728 ntBASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ALMS1Q8TCU4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 COX5BP2-201ENST00000392354 334 ntBASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 U91328.1-201ENST00000437528 223 ntBASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AL596325.1-201ENST00000563991 1082 ntBASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 IGHV3-72-202ENST00000621503 303 ntBASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
ALMS1Q8TCU4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.83□□□□□ -0.51
ALMS1Q8TCU4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
ALMS1Q8TCU4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
ALMS1Q8TCU4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
ALMS1Q8TCU4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.83□□□□□ -0.51
ALMS1Q8TCU4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AC002056.1-201ENST00000395613 760 ntBASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AC116407.2-201ENST00000613639 860 ntBASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AC092580.3-201ENST00000430932 139 ntBASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms