Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK4Q8NE63 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 AP000593.1-201ENST00000393668 712 ntBASIC17.28■□□□□ 0.36
HIPK4Q8NE63 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK4Q8NE63 HYMAI-201ENST00000635591 3347 ntBASIC17.27■□□□□ 0.36
HIPK4Q8NE63 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.27■□□□□ 0.36
HIPK4Q8NE63 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 AC105020.1-201ENST00000435356 2205 ntBASIC17.27■□□□□ 0.35
HIPK4Q8NE63 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.27■□□□□ 0.35
HIPK4Q8NE63 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 AL162727.3-201ENST00000635661 2787 ntBASIC17.26■□□□□ 0.35
HIPK4Q8NE63 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 MIR564-202ENST00000385049 94 ntBASIC17.26■□□□□ 0.35
HIPK4Q8NE63 MESTP1-201ENST00000404287 994 ntBASIC17.26■□□□□ 0.35
HIPK4Q8NE63 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.26■□□□□ 0.35
HIPK4Q8NE63 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms