Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 AC023274.1-201ENST00000418278 595 ntBASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 LAGE3P1-201ENST00000425356 484 ntBASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 METTL21AP1-201ENST00000438852 635 ntBASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 AC009102.3-201ENST00000623118 1491 ntBASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.97■□□□□ 0.31
ZNF248Q8NDW4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 SNHG9-202ENST00000564014 471 ntBASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 NKAPP1-205ENST00000585790 367 ntBASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 AP002414.3-201ENST00000589352 1468 ntBASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 HEIH-201ENST00000623091 1652 ntBASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF248Q8NDW4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.96■□□□□ 0.3
ZNF248Q8NDW4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.96■□□□□ 0.3
ZNF248Q8NDW4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF248Q8NDW4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF248Q8NDW4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
ZNF248Q8NDW4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF248Q8NDW4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AC009947.1-201ENST00000444350 727 ntBASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AL596442.2-201ENST00000610240 980 ntBASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 MIR1199-201ENST00000621445 119 ntBASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 PGM5P2-202ENST00000637225 1043 ntBASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
ZNF248Q8NDW4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms