Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 NUS1P2-201ENST00000417358 873 ntBASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 AC111152.3-201ENST00000569699 673 ntBASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 AC104581.1-202ENST00000635932 2618 ntBASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 TBC1D3P5-201ENST00000579401 1545 ntBASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00304Q8N9R0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 AC009113.1-201ENST00000570267 2443 ntBASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 POM121L3P-201ENST00000419331 1163 ntBASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00304Q8N9R0 FOSL1P1-201ENST00000511041 816 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms