Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 FAM86EP-206ENST00000510506 987 ntBASIC17.17■□□□□ 0.34
KRT78Q8N1N4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 IGHV3-41-201ENST00000613121 348 ntBASIC17.17■□□□□ 0.34
KRT78Q8N1N4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT78Q8N1N4 KRT8P47-201ENST00000604727 1398 ntBASIC17.16■□□□□ 0.34
KRT78Q8N1N4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 OR6D1P-203ENST00000641209 4860 ntBASIC17.16■□□□□ 0.34
KRT78Q8N1N4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 BX276092.5-203ENST00000456199 560 ntBASIC17.16■□□□□ 0.34
KRT78Q8N1N4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 AL121672.3-201ENST00000608644 468 ntBASIC17.16■□□□□ 0.34
KRT78Q8N1N4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 AC067852.2-201ENST00000590513 2313 ntBASIC17.16■□□□□ 0.34
KRT78Q8N1N4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT78Q8N1N4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 AC124864.1-201ENST00000623408 392 ntBASIC17.15■□□□□ 0.34
KRT78Q8N1N4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KRT78Q8N1N4 AC009949.1-201ENST00000623048 1830 ntBASIC17.14■□□□□ 0.34
KRT78Q8N1N4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT78Q8N1N4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms