Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CPNE9Q8IYJ1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 AL645929.1-201ENST00000420084 975 ntBASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 AC112698.1-201ENST00000510299 916 ntBASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE9Q8IYJ1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE9Q8IYJ1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.58■□□□□ 0.41
CPNE9Q8IYJ1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE9Q8IYJ1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE9Q8IYJ1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE9Q8IYJ1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CPNE9Q8IYJ1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 AC116407.2-201ENST00000613639 860 ntBASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE9Q8IYJ1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 AL049597.2-201ENST00000565575 961 ntBASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.57■□□□□ 0.4
CPNE9Q8IYJ1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms