Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 MFAP1P1-201ENST00000442257 1255 ntBASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 AF186192.3-201ENST00000583427 947 ntBASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 AL049637.2-201ENST00000641778 930 ntBASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 SNORA78-201ENST00000459373 127 ntBASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 MIR4497-201ENST00000583208 89 ntBASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM42Q8IWZ5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 AC100803.2-201ENST00000562459 1963 ntBASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 MESTP1-201ENST00000404287 994 ntBASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 SLC25A1P4-201ENST00000567977 778 ntBASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM42Q8IWZ5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms