Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 IGLL3P-201ENST00000412472 434 ntBASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 METTL21AP1-201ENST00000438852 635 ntBASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 AC100803.2-201ENST00000562459 1963 ntBASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 AC009336.1-201ENST00000608941 1553 ntBASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.93■□□□□ 0.62
NPAS4Q8IUM7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 AP002414.1-201ENST00000391405 1147 ntBASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 AL353135.1-201ENST00000606729 504 ntBASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 GGTLC5P-201ENST00000617623 998 ntBASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 AC097637.2-201ENST00000624096 1997 ntBASIC18.92■□□□□ 0.62
NPAS4Q8IUM7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 AC009949.1-201ENST00000623048 1830 ntBASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 PTCHD3P3-201ENST00000403073 906 ntBASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 AL078644.1-201ENST00000609881 752 ntBASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
NPAS4Q8IUM7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NPAS4Q8IUM7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms