Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 AC008556.1-201ENST00000610908 2040 ntBASIC17.91■□□□□ 0.46
PACS2Q86VP3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PACS2Q86VP3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 KRT18P16-201ENST00000510337 1294 ntBASIC17.9■□□□□ 0.46
PACS2Q86VP3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AF186192.3-201ENST00000583427 947 ntBASIC17.9■□□□□ 0.46
PACS2Q86VP3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AC006449.5-201ENST00000610658 2098 ntBASIC17.9■□□□□ 0.46
PACS2Q86VP3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 AC104640.1-201ENST00000562617 2109 ntBASIC17.9■□□□□ 0.46
PACS2Q86VP3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.9■□□□□ 0.46
PACS2Q86VP3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PACS2Q86VP3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PACS2Q86VP3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PACS2Q86VP3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.89■□□□□ 0.46
PACS2Q86VP3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.89■□□□□ 0.46
PACS2Q86VP3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.89■□□□□ 0.46
PACS2Q86VP3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
PACS2Q86VP3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PACS2Q86VP3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 AKR1B10P2-201ENST00000577332 927 ntBASIC17.89■□□□□ 0.45
PACS2Q86VP3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 AL049637.2-201ENST00000641778 930 ntBASIC17.89■□□□□ 0.45
PACS2Q86VP3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 AC099063.4-201ENST00000641099 1602 ntBASIC17.89■□□□□ 0.45
PACS2Q86VP3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PACS2Q86VP3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.89■□□□□ 0.45
PACS2Q86VP3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PACS2Q86VP3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.88■□□□□ 0.45
PACS2Q86VP3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms