Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAPH1Q70E73 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAPH1Q70E73 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.89■□□□□ 0.45
RAPH1Q70E73 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAPH1Q70E73 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAPH1Q70E73 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAPH1Q70E73 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 HMGA1P5-201ENST00000412453 271 ntBASIC17.88■□□□□ 0.45
RAPH1Q70E73 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 NEK4P2-201ENST00000580004 1012 ntBASIC17.88■□□□□ 0.45
RAPH1Q70E73 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 AC108860.2-201ENST00000562760 2183 ntBASIC17.88■□□□□ 0.45
RAPH1Q70E73 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RAPH1Q70E73 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAPH1Q70E73 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 FAM87A-204ENST00000613235 858 ntBASIC17.87■□□□□ 0.45
RAPH1Q70E73 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAPH1Q70E73 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
RAPH1Q70E73 NFIC-211ENST00000641145 8399 ntBASIC17.87■□□□□ 0.45
RAPH1Q70E73 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 AP000523.1-201ENST00000398242 1049 ntBASIC17.86■□□□□ 0.45
RAPH1Q70E73 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.86■□□□□ 0.45
RAPH1Q70E73 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RAPH1Q70E73 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAPH1Q70E73 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms