Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC149Q6ZUS6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 AC004817.3-201ENST00000602957 2129 ntBASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC149Q6ZUS6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC149Q6ZUS6 SIRPAP1-201ENST00000448467 1770 ntBASIC18.58■□□□□ 0.57
CCDC149Q6ZUS6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC149Q6ZUS6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC149Q6ZUS6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC149Q6ZUS6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC149Q6ZUS6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC149Q6ZUS6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC149Q6ZUS6 AL096828.2-201ENST00000567259 1965 ntBASIC18.58■□□□□ 0.56
CCDC149Q6ZUS6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC149Q6ZUS6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 AC073621.1-201ENST00000392730 636 ntBASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 AL596442.2-201ENST00000610240 980 ntBASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC149Q6ZUS6 AC087289.5-201ENST00000586076 3175 ntBASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 AL049757.1-201ENST00000616842 1596 ntBASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 KRT18P28-201ENST00000453838 1332 ntBASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 AC003669.1-201ENST00000334569 611 ntBASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 KLF4P1-201ENST00000412782 1185 ntBASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC149Q6ZUS6 AC005829.1-201ENST00000570002 483 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms