Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 CYP51A1P1-201ENST00000492267 1507 ntBASIC11.27□□□□□ -0.61
LINC00575Q6W349 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 AL023284.2-201ENST00000405850 579 ntBASIC11.27□□□□□ -0.61
LINC00575Q6W349 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 RHEB-204ENST00000472642 900 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 AC022898.2-201ENST00000616822 1312 ntBASIC11.27□□□□□ -0.61
LINC00575Q6W349 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 AL596257.1-201ENST00000641463 2694 ntBASIC11.27□□□□□ -0.61
LINC00575Q6W349 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 AC016396.2-201ENST00000562575 1417 ntBASIC11.26□□□□□ -0.61
LINC00575Q6W349 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 AC063926.3-201ENST00000624734 5658 ntBASIC11.26□□□□□ -0.61
LINC00575Q6W349 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 THEM4-205ENST00000489410 643 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 UNC93B4-201ENST00000505679 747 ntBASIC11.26□□□□□ -0.61
LINC00575Q6W349 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 OAS3-207ENST00000551007 998 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 AL050303.2-201ENST00000619798 666 ntBASIC11.26□□□□□ -0.61
LINC00575Q6W349 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 AC026691.1-201ENST00000602502 2017 ntBASIC11.26□□□□□ -0.61
LINC00575Q6W349 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 LINC02199-201ENST00000506655 2702 ntBASIC11.26□□□□□ -0.61
LINC00575Q6W349 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
LINC00575Q6W349 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00575Q6W349 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00575Q6W349 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC00575Q6W349 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00575Q6W349 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC00575Q6W349 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms