Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPP4R4Q6NUP7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP4R4Q6NUP7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP4R4Q6NUP7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPP4R4Q6NUP7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.07■□□□□ 0.32
PPP4R4Q6NUP7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 AC005363.2-201ENST00000618631 242 ntBASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 AC116562.4-202ENST00000641738 218 ntBASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.06■□□□□ 0.32
PPP4R4Q6NUP7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 AC145285.6-201ENST00000604632 637 ntBASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPP4R4Q6NUP7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 AL356309.3-201ENST00000624132 1934 ntBASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms