Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TTC39BQ5VTQ0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 AL096828.2-201ENST00000567259 1965 ntBASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 AC112698.1-201ENST00000510299 916 ntBASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.5■□□□□ 0.55
TTC39BQ5VTQ0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 OR6D1P-202ENST00000641007 5290 ntBASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 IGHV3-47-201ENST00000425060 335 ntBASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TTC39BQ5VTQ0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms