Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC005229.1-201ENST00000392885 409 ntBASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 AC243960.2-201ENST00000600996 747 ntBASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 AC004840.1-201ENST00000636359 365 ntBASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL13A1Q5TAT6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 AP001889.1-201ENST00000525414 633 ntBASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
COL13A1Q5TAT6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 LBH-202ENST00000401506 485 ntTSL 3 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 AC093004.1-201ENST00000508850 424 ntBASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 TEX21P-204ENST00000641479 1693 ntBASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL13A1Q5TAT6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL13A1Q5TAT6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms