Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 KRT16P1-201ENST00000399124 1418 ntBASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
ANKRD55Q3KP44 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ANKRD55Q3KP44 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 AL031985.4-201ENST00000642138 673 ntBASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
ANKRD55Q3KP44 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 AC011270.2-201ENST00000624293 2550 ntBASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 REXO1L11P-201ENST00000620964 1927 ntBASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ANKRD55Q3KP44 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms