Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 AL591424.1-201ENST00000442569 1213 ntBASIC21.21■□□□□ 0.99
PDS5AQ29RF7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 AL139424.1-201ENST00000607572 797 ntBASIC21.21■□□□□ 0.99
PDS5AQ29RF7 MIR1199-201ENST00000621445 119 ntBASIC21.21■□□□□ 0.99
PDS5AQ29RF7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 AL354751.1-201ENST00000412768 1863 ntBASIC21.21■□□□□ 0.99
PDS5AQ29RF7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDS5AQ29RF7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 ELK2BP-201ENST00000415014 1224 ntBASIC21.2■□□□□ 0.98
PDS5AQ29RF7 AC009947.1-201ENST00000444350 727 ntBASIC21.2■□□□□ 0.98
PDS5AQ29RF7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 AC027601.4-201ENST00000611259 610 ntBASIC21.2■□□□□ 0.98
PDS5AQ29RF7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
PDS5AQ29RF7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDS5AQ29RF7 REXO1L11P-201ENST00000620964 1927 ntBASIC21.19■□□□□ 0.98
PDS5AQ29RF7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 PGAM5P1-201ENST00000518923 814 ntBASIC21.18■□□□□ 0.98
PDS5AQ29RF7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 AC005593.1-201ENST00000624894 515 ntBASIC21.18■□□□□ 0.98
PDS5AQ29RF7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDS5AQ29RF7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.17■□□□□ 0.98
PDS5AQ29RF7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms