Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC092658.1-201ENST00000505836 891 ntBASIC10.87□□□□□ -0.67
HSPG2P98160 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.87□□□□□ -0.67
HSPG2P98160 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.87□□□□□ -0.67
HSPG2P98160 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.87□□□□□ -0.67
HSPG2P98160 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.87□□□□□ -0.67
HSPG2P98160 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.87□□□□□ -0.67
HSPG2P98160 KRT17P7-201ENST00000451704 1104 ntBASIC10.87□□□□□ -0.67
HSPG2P98160 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
HSPG2P98160 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
HSPG2P98160 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.87□□□□□ -0.67
HSPG2P98160 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.87□□□□□ -0.67
HSPG2P98160 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.87□□□□□ -0.67
HSPG2P98160 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
HSPG2P98160 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC10.86□□□□□ -0.67
HSPG2P98160 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
HSPG2P98160 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.86□□□□□ -0.67
HSPG2P98160 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.86□□□□□ -0.67
HSPG2P98160 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.86□□□□□ -0.67
HSPG2P98160 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC10.86□□□□□ -0.67
HSPG2P98160 AC022144.1-201ENST00000602255 1580 ntBASIC10.86□□□□□ -0.67
HSPG2P98160 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC10.86□□□□□ -0.67
HSPG2P98160 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC10.86□□□□□ -0.67
HSPG2P98160 AL512384.1-201ENST00000406683 331 ntBASIC10.86□□□□□ -0.67
HSPG2P98160 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
HSPG2P98160 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC10.86□□□□□ -0.67
HSPG2P98160 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
HSPG2P98160 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC10.86□□□□□ -0.67
HSPG2P98160 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC10.86□□□□□ -0.67
HSPG2P98160 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.86□□□□□ -0.67
HSPG2P98160 AC005237.2-201ENST00000434368 219 ntBASIC10.86□□□□□ -0.67
HSPG2P98160 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.86□□□□□ -0.67
HSPG2P98160 AC079140.1-201ENST00000508039 487 ntBASIC10.86□□□□□ -0.67
HSPG2P98160 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.86□□□□□ -0.67
HSPG2P98160 AP000842.3-202ENST00000569238 1080 ntBASIC10.86□□□□□ -0.67
HSPG2P98160 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.86□□□□□ -0.67
HSPG2P98160 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 SPDYE12P-201ENST00000618416 771 ntBASIC10.86□□□□□ -0.67
HSPG2P98160 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC10.86□□□□□ -0.67
HSPG2P98160 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 MYCLP1-201ENST00000372451 1075 ntBASIC10.86□□□□□ -0.67
HSPG2P98160 CDK4-206ENST00000549606 558 ntTSL 2 BASIC10.86□□□□□ -0.67
HSPG2P98160 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.86□□□□□ -0.67
HSPG2P98160 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HSPG2P98160 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.85□□□□□ -0.67
HSPG2P98160 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 AC069120.2-201ENST00000524091 540 ntBASIC10.85□□□□□ -0.67
HSPG2P98160 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC10.85□□□□□ -0.67
HSPG2P98160 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC10.85□□□□□ -0.67
HSPG2P98160 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.85□□□□□ -0.67
HSPG2P98160 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC10.85□□□□□ -0.67
HSPG2P98160 CXCL1P1-201ENST00000502804 216 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms