Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 AKR1C7P-201ENST00000305623 895 ntBASIC15.66■□□□□ 0.1
NKX6-1P78426 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 NUS1P2-201ENST00000417358 873 ntBASIC15.66■□□□□ 0.1
NKX6-1P78426 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
NKX6-1P78426 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX6-1P78426 IGHV3-47-201ENST00000425060 335 ntBASIC15.66■□□□□ 0.1
NKX6-1P78426 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NKX6-1P78426 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX6-1P78426 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.66■□□□□ 0.1
NKX6-1P78426 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.66■□□□□ 0.1
NKX6-1P78426 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX6-1P78426 REXO1L6P-202ENST00000619970 1078 ntBASIC15.66■□□□□ 0.1
NKX6-1P78426 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NKX6-1P78426 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.66■□□□□ 0.1
NKX6-1P78426 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NKX6-1P78426 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NKX6-1P78426 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NKX6-1P78426 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX6-1P78426 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
NKX6-1P78426 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NKX6-1P78426 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NKX6-1P78426 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX6-1P78426 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX6-1P78426 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.65■□□□□ 0.1
NKX6-1P78426 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.65■□□□□ 0.1
NKX6-1P78426 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 AC092865.5-201ENST00000545435 363 ntBASIC15.65■□□□□ 0.1
NKX6-1P78426 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NKX6-1P78426 AL773604.1-201ENST00000617417 272 ntBASIC15.65■□□□□ 0.1
NKX6-1P78426 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.65■□□□□ 0.1
NKX6-1P78426 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NKX6-1P78426 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 GMCL1P1-201ENST00000463439 1581 ntBASIC15.65■□□□□ 0.1
NKX6-1P78426 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 WIZP1-201ENST00000531444 2299 ntBASIC15.65■□□□□ 0.1
NKX6-1P78426 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.65■□□□□ 0.1
NKX6-1P78426 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NKX6-1P78426 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NKX6-1P78426 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
NKX6-1P78426 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-1P78426 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NKX6-1P78426 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-1P78426 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.64■□□□□ 0.09
NKX6-1P78426 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.64■□□□□ 0.09
NKX6-1P78426 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NKX6-1P78426 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.64■□□□□ 0.09
NKX6-1P78426 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms