Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEP78395 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.95■□□□□ 0.46
PRAMEP78395 LINC00896-202ENST00000609602 2128 ntBASIC17.95■□□□□ 0.46
PRAMEP78395 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEP78395 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEP78395 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEP78395 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PRAMEP78395 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.94■□□□□ 0.46
PRAMEP78395 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.94■□□□□ 0.46
PRAMEP78395 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEP78395 GPR32P1-201ENST00000601788 811 ntBASIC17.94■□□□□ 0.46
PRAMEP78395 HYMAI.1-201ENST00000620949 238 ntBASIC17.94■□□□□ 0.46
PRAMEP78395 AC009154.2-201ENST00000621177 724 ntBASIC17.94■□□□□ 0.46
PRAMEP78395 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEP78395 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEP78395 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
PRAMEP78395 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEP78395 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEP78395 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEP78395 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEP78395 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEP78395 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRAMEP78395 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEP78395 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRAMEP78395 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEP78395 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEP78395 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRAMEP78395 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.93■□□□□ 0.46
PRAMEP78395 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 AL353692.3-201ENST00000407031 1396 ntBASIC17.93■□□□□ 0.46
PRAMEP78395 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.93■□□□□ 0.46
PRAMEP78395 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
PRAMEP78395 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEP78395 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.93■□□□□ 0.46
PRAMEP78395 AL671277.2-201ENST00000458060 996 ntBASIC17.93■□□□□ 0.46
PRAMEP78395 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.93■□□□□ 0.46
PRAMEP78395 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.93■□□□□ 0.46
PRAMEP78395 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEP78395 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.93■□□□□ 0.46
PRAMEP78395 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEP78395 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PRAMEP78395 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEP78395 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEP78395 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PRAMEP78395 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRAMEP78395 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEP78395 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PRAMEP78395 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.92■□□□□ 0.46
PRAMEP78395 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PRAMEP78395 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.92■□□□□ 0.46
PRAMEP78395 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.92■□□□□ 0.46
PRAMEP78395 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.92■□□□□ 0.46
PRAMEP78395 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.92■□□□□ 0.46
PRAMEP78395 KRT18P21-201ENST00000515767 1272 ntBASIC17.92■□□□□ 0.46
PRAMEP78395 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.92■□□□□ 0.46
PRAMEP78395 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.92■□□□□ 0.46
PRAMEP78395 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PRAMEP78395 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.92■□□□□ 0.46
PRAMEP78395 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PRAMEP78395 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.92■□□□□ 0.46
PRAMEP78395 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRAMEP78395 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PRAMEP78395 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PRAMEP78395 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.91■□□□□ 0.46
PRAMEP78395 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms