Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 ESRRAP1-201ENST00000400596 1257 ntBASIC16.26■□□□□ 0.19
CDC42P60953 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC42P60953 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDC42P60953 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDC42P60953 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CDC42P60953 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.26■□□□□ 0.19
CDC42P60953 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDC42P60953 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CDC42P60953 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDC42P60953 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDC42P60953 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CDC42P60953 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC42P60953 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDC42P60953 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.25■□□□□ 0.19
CDC42P60953 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC42P60953 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC42P60953 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC42P60953 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC42P60953 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDC42P60953 KRT18P6-201ENST00000555540 1265 ntBASIC16.25■□□□□ 0.19
CDC42P60953 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 AC008687.5-201ENST00000593746 558 ntBASIC16.25■□□□□ 0.19
CDC42P60953 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDC42P60953 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC42P60953 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC42P60953 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 AC018695.7-201ENST00000624587 2492 ntBASIC16.25■□□□□ 0.19
CDC42P60953 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC42P60953 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDC42P60953 AC106886.4-201ENST00000623557 2502 ntBASIC16.24■□□□□ 0.19
CDC42P60953 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC42P60953 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDC42P60953 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC42P60953 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CDC42P60953 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC42P60953 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC42P60953 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC42P60953 AC097488.1-201ENST00000507834 756 ntBASIC16.24■□□□□ 0.19
CDC42P60953 AC104390.1-201ENST00000555663 520 ntBASIC16.24■□□□□ 0.19
CDC42P60953 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.24■□□□□ 0.19
CDC42P60953 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC42P60953 AC073648.6-201ENST00000641589 218 ntBASIC16.24■□□□□ 0.19
CDC42P60953 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC42P60953 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC42P60953 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDC42P60953 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC42P60953 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC42P60953 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms