Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL136038.4-201ENST00000603606 1261 ntBASIC17.39■□□□□ 0.37
CDH13P55290 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH13P55290 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH13P55290 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH13P55290 HLA-J-201ENST00000462773 1622 ntBASIC17.39■□□□□ 0.37
CDH13P55290 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH13P55290 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH13P55290 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH13P55290 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDH13P55290 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDH13P55290 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH13P55290 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDH13P55290 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDH13P55290 LIN28AP1-201ENST00000429574 405 ntBASIC17.38■□□□□ 0.37
CDH13P55290 KRT18P65-201ENST00000439811 1286 ntBASIC17.38■□□□□ 0.37
CDH13P55290 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH13P55290 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH13P55290 AC116407.2-201ENST00000613639 860 ntBASIC17.38■□□□□ 0.37
CDH13P55290 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH13P55290 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH13P55290 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.38■□□□□ 0.37
CDH13P55290 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
CDH13P55290 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH13P55290 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH13P55290 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH13P55290 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH13P55290 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH13P55290 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH13P55290 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CDH13P55290 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH13P55290 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH13P55290 SPDYE15P-201ENST00000424157 909 ntBASIC17.37■□□□□ 0.37
CDH13P55290 ATP5G1P1-201ENST00000448724 379 ntBASIC17.37■□□□□ 0.37
CDH13P55290 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.37■□□□□ 0.37
CDH13P55290 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH13P55290 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH13P55290 AC004263.2-201ENST00000617183 678 ntBASIC17.37■□□□□ 0.37
CDH13P55290 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH13P55290 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH13P55290 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDH13P55290 KRT89P-201ENST00000620027 1478 ntBASIC17.37■□□□□ 0.37
CDH13P55290 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH13P55290 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH13P55290 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH13P55290 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.36■□□□□ 0.37
CDH13P55290 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDH13P55290 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH13P55290 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH13P55290 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms